Back

Frontiers in Cell and Developmental Biology

Frontiers Media SA

Preprints posted in the last 30 days, ranked by how well they match Frontiers in Cell and Developmental Biology's content profile, based on 233 papers previously published here. The average preprint has a 0.17% match score for this journal, so anything above that is already an above-average fit.

1
Alcama expressed in blood retina barrier and Muller glia is involved in zebrafish retina regeneration

Thomas Michael, S.; Allan, K.; Rini, M.; DiCicco, R.; Ramos, M.; Yuan, A.

2026-08-25 cell biology 10.64898/2026.08.24.746827 medRxiv
Top 0.4%
5.6%
Show abstract

Activated leukocyte cell adhesion molecule A (Alcama) plays a role in axonal guidance, cell differentiation, and retinal lamination in a developing retina and was identified as a marker for activated Muller glial cells in adult zebrafish. However, its spatiotemporal localization and its involvement in retina regeneration remains unclear. Here we induced focal photoreceptor damage in zebrafish using laser photocoagulation and examined the expression and localization of Alcama at different time points post lesion. Immunohistochemistry in wild type fish and Tg(kdrl-EGFP) fish showed Alcama localized to the blood retina barrier with increased expression in Muller glial end feet and radial processes in a regenerating retina. To confirm its role in retina regeneration, alcama expression was transiently knocked down using morpholinos in adult fish. Scanning laser ophthalmoscopy, Zpr1 immunostaining and EdU staining showed delayed retina regeneration in alcama knockdown fish, indicating a possible role for Alcama in zebrafish retina regeneration.

2
Blastema cells exhibit intrinsic migratory capacity but fail to induce osteoblast off-bone migration during Zebrafish fin regeneration

Sehring, I. M.; Weidinger, G.

2026-08-07 developmental biology 10.64898/2026.08.06.743241 medRxiv
Top 0.4%
5.5%
Show abstract

Zebrafish bone regeneration is a highly efficient process, enabling the complete restoration of an amputated fin within few weeks. The hallmark of this epimorphic regeneration is the formation of a blastema atop of a bony fin ray. Osteoblasts near the injury site dedifferentiate and migrate off the bone to contribute to the developing blastema. We show that an injury or a blastema alone is not sufficient to trigger off-bone migration of osteoblasts. Surprisingly, we found that blastema cells themselves possess intrinsic migratory properties. Moreover, when multiple injury sites are present, a preferential distal migration could be observed. We conclude that multiple injuries are hierarchical organized, and that injuries with the highest regenerative potential take priority.

3
The monoaminergic system in a bivalve larva: temporal deployment and spatial organization

Risso, B.; Blahuta, J.; Besnardeau, L.; Balbi, T.; Dumollard, R.; Canesi, L.; Miglioli, A.

2026-08-20 developmental biology 10.64898/2026.08.17.745212 medRxiv
Top 0.4%
5.5%
Show abstract

Originating at the base of the bilaterian tree of life, the monoaminergic (MOA) system is a pivotal and evolutionarily conserved regulator of animal development and of responses to changing environmental conditions. Investigating the ontogeny of monoaminergic modulation in model systems such as marine bivalve molluscs is therefore particularly relevant, as their life cycle and developmental transitions are strongly influenced by environmental cues. Here, we characterized the spatio-temporal and tissue-specific expression of components of the MOA system during early larval development of the Mediterranean mussel Mytilus galloprovincialis using both time resolved transcriptomics and in situ Hybridization Chain Reaction (HCR). Our results identify serotonin and dopamine as the predominant and interconnected monoaminergic pathways deployed during early mussel development, with receptors, enzymes, and selective transporters broadly expressed across both neuronal and non-neuronal tissues. Notably, the expression of receptors preceding that of the corresponding biosynthetic enzymes indicates early, non-neuronal roles of monoaminergic signalling, supported by their localization in peripheral tissues such as ciliated epithelia. Altogether, These findings support the hypothesis that the MOA system acts as a pervasive and tightly regulated modulator of larval morphogenesis and could therefore play an evolutionary conserved role in mediating development and environmental plasticity in developing bilaterian organisms.

4
Method for modeling oviduct function and impact on embryonic development

Stephens, K. K.; Ahmad, V.; Silva, M. A.; Shifflett, M. K.; Mao, J.; Rizo, J. A.; Hunter, M. I.; Kelleher, A. M.; Winuthayanon, W.

2026-08-07 cell biology 10.64898/2026.08.06.743297 medRxiv
Top 0.5%
5.0%
Show abstract

Direct experimental analysis of the mammalian oviduct is constrained by limited tissue access and the short lifespan of ex vivo preparations. Extracellular matrix-embedded three-dimensional epithelial organoids provide longer-term in vitro models. However, their inward-facing apical surface and the absence of supporting stromal cells limit physiological studies of the oviduct, including ciliary activity and maternal-embryonic interactions. Here, we provide a step-wise protocol detailing the generation of mouse and human oviductal assembloids in which epithelial cells form an outward-facing (apical-out) layer around a stromal core. Epithelial and stromal cells from adult mouse oviducts or human Fallopian tubes are isolated, expanded separately, and subsequently aggregated in a rotational culture system. The protocol also outlines morphological and immunostaining criteria for confirming cellular organization, whole-mount detection of external cilia, measurement of ciliary beat frequency, and co-culture of mouse assembloids with preimplantation embryos. Mouse and human assembloids retained epithelial and stromal identity and displayed cilia at the accessible outer surface. In a proof-of-concept experiment, embryos co-cultured with the assembloids developed to blastocysts at a rate similar to that of in vivo-derived blastocysts. This reductionist system provides a straightforward and tractable model to investigate oviduct physiology and embryo-maternal communication while allowing direct manipulation and observation of the epithelial interface. Graphical Abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=148 SRC="FIGDIR/small/743297v1_ufig1.gif" ALT="Figure 1"> View larger version (50K): org.highwire.dtl.DTLVardef@1917a7borg.highwire.dtl.DTLVardef@41d7org.highwire.dtl.DTLVardef@e2bf98org.highwire.dtl.DTLVardef@90c9f3_HPS_FORMAT_FIGEXP M_FIG C_FIG SummaryThe protocol for generating mouse and human oviductal assembloids by combining epithelial and stromal cells for studying oviductal function in an in vitro setting.

5
A Conserved Regenerative Architecture Underlies Skeletal Muscle Repair in Adult Zebrafish

Novkovic, M.; Milicevic, A.; Milosevic, E.; Bojic, L.; Jasnic, J.; Kojic, S.

2026-08-18 genomics 10.64898/2026.08.12.744335 medRxiv
Top 0.6%
4.8%
Show abstract

Adult zebrafish efficiently regenerate skeletal muscle following different types of injury; however, the molecular programs involved in repair after extensive cryoinjury remain to be comprehensively characterized. Here, we explored the transcriptomic response of adult zebrafish skeletal muscle at 7 days post cryoinjury (dpci), a stage marked by ongoing tissue clearance, progenitor expansion, myogenic differentiation, and nascent myofiber formation, and compared it with phase-matched stab wound injury. Cryoinjury induced a broad transcriptional response, with 5,330 differentially expressed genes. Integrated enrichment and protein-protein interaction analyses revealed that, at 7 dpci, zebrafish skeletal muscle functions as an integrated regenerative system in which immune remodeling, progenitor expansion, myogenic differentiation, extracellular matrix reconstruction, mechanotransduction, biosynthetic adaptation, proteostasis, and intracellular trafficking operate simultaneously. In parallel, mature sarcomeric and oxidative metabolic programs were suppressed, consistent with ongoing tissue reconstruction and structural immaturity. Comparison with stab-wounded skeletal muscle revealed substantial transcriptional conservation, as 612 of 717 stab-wound-responsive genes (85%) were also differentially expressed after cryoinjury. Shared upregulated genes formed coherent functional modules related to proliferation, extracellular matrix organization and signaling, immune regulation, muscle differentiation, and protein processing. Thus, distinct injury modalities converge on a common regenerative program, while cryoinjury elicits a quantitatively broader transcriptional response. These findings support a conserved regenerative architecture of adult zebrafish skeletal muscle repair, in which interconnected biological modules act coordinately, with the breadth of transcriptional engagement reflecting regenerative demand.

6
Comparison of Culture Systems for Mouse Living Myocardial Slices in Cardiac Fibrosis Research

Kopse, N.; Bonazza, G. A.; Laimbacher, A.; Hofman, A.; Distler, O.; Blyszczuk, P.; Kania, G.

2026-08-20 cell biology 10.64898/2026.08.19.745687 medRxiv
Top 0.7%
4.2%
Show abstract

Living myocardial slices (LMS) are a highly relevant ex vivo model for investigating cardiac physiology and disease, as they preserve the native three-dimensional architecture, cellular diversity, and extracellular matrix of the heart. In addition, LMS enable longitudinal functional and molecular analyses. In this study, we established and compared two LMS culture approaches: an air-liquid interface system and a biomimetic culture system. We further examined how different slicing techniques affect tissue quality and longevity within the biomimetic setup. To develop a fibrosis model, LMS were stimulated with transforming growth factor-beta1 (TGF-beta1) and/or exposed to increased mechanical load. Tissue viability was assessed using LIVE/DEAD staining and the MTT assay, while cytotoxicity was evaluated with the LDH-Glo-TM Cytotoxicity assay. Contractile function was measured, and fibrotic remodelling was analysed using RT-qPCR, ELISA, and immunohistochemistry. Our results demonstrate that LMS cultured in the biomimetic system exhibit superior viability, structural integrity, and functional performance compared with those maintained at the air-liquid interface. Mouse LMS could be stably cultured for up to one week in the biomimetic system. Importantly, sample preparation, particularly the slicing method, had a significant impact on tissue quality and culture duration. While TGF-beta1 stimulation alone did not consistently induce fibrosis, combining TGF-beta1 treatment with increased mechanical load led to more pronounced fibrotic remodelling in LMS. These findings highlight the importance of biomechanical cues in modelling cardiac fibrosis ex vivo and support the biomimetic system as a robust platform for functional and disease-relevant studies.

7
Human buccal epithelial microplicae maintain a characteristic wavelength despite variable network topology

McConnell, G.

2026-08-07 cell biology 10.64898/2026.08.06.743190 medRxiv
Top 0.7%
4.1%
Show abstract

Microplicae are ridge-like membrane projections that are prominent features of many epithelial surfaces, yet little is known about the principles governing their spatial organisation. Determining whether microplicae represent stochastic membrane folds or biologically organised surface architectures is essential for understanding their formation and functional roles. Here, differential interference contrast images of human buccal epithelial cells were analysed using quantitative image-processing approaches. Ridge networks were segmented and characterised using complementary measurements of characteristic wavelength, including medial-axis and nearest-neighbour Voronoi analyses, together with skeleton-based metrics describing network architecture. Analysis of n=100 buccal epithelial cells sampled from n=10 donors revealed a reproducible sub-micron characteristic wavelength. Mean medial-axis spacing was 0.511 {+/-} 0.042 {micro}m and mean Voronoi nearest-neighbour spacing was 0.588 {+/-} 0.057 {micro}m. Characteristic wavelength exhibited CV of between only 8.26% and 9.67% across the dataset. However, metrics describing network architecture, including ridge density, branching and connectivity, varied by up to 109%. Donor-level analysis reported the same overall trends, with conservation of the characteristic wavelength while network parameters had considerably greater variation. These findings identify a previously unrecognised organising principle of microplical architecture, suggesting that epithelial membrane organisation is regulated through conservation of an intrinsic geometric length scale while network topology remains comparatively free to remodel.

8
Extracellular matrix context shapes morphogenesis and lactation-associated states in human milk-derived mammary organoids

Hasenauer, A.; Pascetta, V.; McCabe, M. C.; Saviola, A.; Ponta, S.; Yilmaz, M.; Coelius, C. L.; Bossung, V.; Biesgen, T.; Hansen, K.; Prekovic, S.; Ochsenbein-Koelble, N.; Zenobi-Wong, M.

2026-08-24 cell biology 10.64898/2026.08.23.746503 medRxiv
Top 0.8%
4.0%
Show abstract

The mammary gland relies on reciprocal interactions between epithelial cells and their surrounding extracellular matrix (ECM) to form and maintain milk-producing tissue structures. Yet these processes remain difficult to study in human model systems. Mammary epithelial cells (MECs) can be isolated noninvasively from breast milk, but whether they generate three-dimensional organoids and respond to matrix cues has been unclear. Here, human milk-derived MECs (milk MECs) spontaneously form complex organoids, including polarized acinar and terminal duct lobular unit-like structures after isolation. To investigate how matrix composition shapes these organoids, milk MECs were cultured in decellularized mammary ECM (dECM), Matrigel, and collagen I. In dECM, milk MECs formed polarized branched networks with aligned actin organization along collagen fibrils, whereas in Matrigel they adopted a more lactation-associated state, marked by {beta}-casein expression and milk fat globules. Together, these findings establish breast milk-derived MEC organoids as a human model to study how ECM context regulates mammary morphogenesis and lactation biology.

9
Vascularized Brain Organoid: A Versatile Platform Models Brain Cancer and Traumatic Brain Injury

Huang, S.-W. A.; LIN, C. H. A.

2026-08-12 cell biology 10.64898/2026.08.11.744207 medRxiv
Top 0.9%
3.5%
Show abstract

Human iPSC-derived brain organoids are revolutionizing tools to study layers biology, synergize disease modeling, and accelerate therapeutic discoveries that overcome obstacles in monolayer cell culture or animal models. The neurovascular unit including vasculature and microglia is critical for brain development, maintenance of synaptic plasticity and neural activity, and the high metabolic demands of long-term culture. We present a methodology to incorporate these important components during organoid generation and discuss potential approach, aiming consistent production of vascularized organoids for longitudinal study. We also demonstrate that this vascularized organoid is a versatile platform to model brain cancer and traumatic brain injury.

10
Placental derived Extracellular Matrix Supports multi-lineage cell attachment and nuclear remodeling revealed by quantitative imaging

Amurrio Zamora, C.; Ingraldi, A.; Dixit, N.; Tabor, A. J.; Mostafa, F.

2026-08-20 cell biology 10.64898/2026.08.19.745555 medRxiv
Top 1.0%
3.3%
Show abstract

Decellularized extracellular matrix (dECM) scaffolds are increasingly used in regenerative medicine, yet the extent to which processed placental dECM retains properties capable of influencing cellular responses remains unclear. This study combines functional cell assays with deep learning-enabled quantitative imaging to determine how dehydrated placental ECM regulates cellular behavior across multiple human cell lineages. Human dermal fibroblasts, cardiac fibroblasts, and osteoblasts were cultured on dehydrated placental ECM or standard cell culture surfaces and assessed for cell attachment, viability, extracellular matrix production, and nuclear morphology. Placental dECM supported attachment and survival across all three cell types, while Pro-Collagen I Alpha 1 secretion varied by cell lineage relative to negative controls. To identify structural responses associated with scaffold culture, an automated imaging pipeline combining Cellpose-based nuclear segmentation with nuclear morphometric analysis was used to quantify nuclear area, eccentricity, and circularity. Quantitative profiling of hundreds of nuclei revealed scaffold-dependent remodeling of nuclear morphology that was not apparent by conventional microscopy. Cells cultured on placental dECM exhibited reduced nuclear area and increased nuclear eccentricity, while cardiac fibroblasts and osteoblasts showed alterations in nuclear circularity. These lineage-dependent morphological responses demonstrate that placental dECM provides more than a permissive substrate for cell attachment and is associated with measurable changes in cellular architecture following processing. Together, these findings support the biological relevance of processed placental dECM as a regenerative biomaterial and demonstrate the utility of quantitative single-cell morphometric analysis for detecting cell-material interactions that may not be apparent through qualitative imaging alone, guiding the rational design of regenerative therapies.

11
Confluent growth state dependent transcriptomic adaptation in A549 lung cancer cells

Sendrayakannan, A.; Yadav, N.; Sahoo, A.; Nanda, R.; Masakapalli, S. K.

2026-08-28 systems biology 10.64898/2026.08.27.747534 medRxiv
Top 1%
3.3%
Show abstract

Cell confluency is a major determinant of cell-cell communication, protein interactions, access to nutrients, and signalling dynamics, thereby significantly impacting biological outcomes. Lung cancer cells like A549 are widely used as screening models for scientific studies wherein their growth in vitro progress from non-confluent to confluent growth. In this study, we investigated the transcriptomic adaptations associated with the transition of A549 cells from baseline non-confluent to confluent growth. Comparative transcriptomic analysis between confluent and cells at baseline identified 815 upregulated and 671 downregulated transcripts. Pathway enrichment analysis of deregulated transcripts in confluent cells revealed enhanced cholesterol and sterol biosynthetic pathways, along with suppression of chromosomal segregation and mitotic pathways. At confluency, an increased expression of glucose transporters (SLC2, SLC60, and SL37 families) and glycolytic pathways, and a decrease in amino acid transporters (SLC1, SLC7, SLC38, and SLC36) and amino acid metabolic pathways is observed. A reduced one-carbon metabolic signature (SHMT2, DHFR, and MTHFD2) and enhanced fatty acid precursor synthesis (HMGCLL1, ALDH6A1, and AASS) were also observed at confluency. 1H NMR profiling of culture media revealed higher glucose and glutamine utilisation with lactate accumulation during culture maturation. Collectively, the data suggest transcriptome-level rewiring in A549 cells with preferential biosynthesis of lipids and sterols at confluency and underscore the importance of considering culture maturity in cancer biology, metabolism, and therapeutic studies.

12
Senotherapeutic role of pemafibrate through autophagy/mitophagy regulation in chronic obstructive pulmonary disease

Matsubayashi, S.; Ito, S.; Hosaka, Y.; Yoshida, M.; Kadota, T.; Hashimoto, M.; Hatano, S.; Maruyama, T.; Fujimoto, S.; Nishioka, S.; Inukai, S.; Fujita, Y.; Minagawa, S.; Hara, H.; Nakada, T.; Nakayama, K.; Ohtuska, T.; Kuwano, K.; Araya, J.

2026-09-02 respiratory medicine 10.64898/2026.08.31.26361865 medRxiv
Top 1%
3.2%
Show abstract

Inadequate autophagy promotes smoking-induced cellular senescence involved in chronic obstructive pulmonary disease (COPD) pathogenesis. Transcription factor EB (TFEB) is a master regulator of the autophagy-lysosome axis. For the first time, we investigated the therapeutic potential of pemafibrate, a putative TFEB inducer. COPD lung epithelial cells showed reduced TFEB expression. Pemafibrate enhanced autophagy/mitophagy flux and restored lysosomal acidification observed during cigarette smoke (CS) extract exposure in human bronchial epithelial cells, resulting in reduced cellular senescence. TFEB knockdown demonstrated involvement of pemafibrate-induced TFEB in these effects. Pemafibrate induced TFEB expression, mitigated alveolar enlargement and airflow obstruction, and attenuated the CS-induced increase in static lung compliance in a long-term CS-exposed mouse model. It reduced the CS exposure-induced cellular senescence, possibly through autophagy/mitophagy, as suggested by bulk RNA sequencing of mouse lungs. A retrospective cohort study showed that patients given pemafibrate displayed attenuated FEV1.0 decline compared with those given bezafibrate or fenofibrate. In conclusion, pemafibrate is a promising therapeutic agent for COPD, potentially exerting its effects through the regulation of the TFEB-autophagy/mitophagy-lysosome axis.

13
Zebrafish prph2a/b and rom1a/b serve distinct functions during cone and rod outer-segment assembly.

Patel, M.; Famulski, J.

2026-08-07 developmental biology 10.64898/2026.08.06.743304 medRxiv
Top 1%
3.1%
Show abstract

Inherited retinal disorders are significant contributors of blindness worldwide. Mutations in Peripherin-2 (PRPH2), a highly conserved vertebrate tetraspanin membrane protein responsible for formation and maintenance of OS morphology, have been shown to cause diverse types of inherited photoreceptor cell (PRC) disorders including but not limited to Leber congenital amaurosis, cone-rod dystrophy, and retinitis pigmentosa. In this study we used a cone-rich diurnal zebrafish model to characterize the loss of PRPH2 function. Of the four PRPH2 zebrafish orthologs only prph2a and prph2b were found to be expressed in PRCs. CRISPR-mediated single mutants of prph2a and prph2b did not yield striking rod or cone phenotypes. Double prph2a/2b mutants exhibited early loss of all cone cells, preceded by cone outer segment disorganization in the form of whorls akin to the phenotypes observed in PRPH2+/- mice. Surprisingly rod photoreceptor cells were not affected and in fact exhibited a striking lengthening of rod OSs with normal disc formation. Overgrowth of rod OSs proceeded up to 1 year, but no degeneration was observed. To determine how rod OS can persist without prhp2a/b we targeted rom1a and rom1b using CRISPR. Injection of rom1a/b crRNA resulted in complete loss of both rod and cone OSs in the prph2a/b double mutants. Surprisingly, inhibition of rom1a/b alone resulted in the loss of rod but not cone OSs. These findings suggest that unlike in mammals, zebrafish rom1a/b is essential for rod OS formation while prph2a/b is essential for cone OSs.

14
Nrl expression and promoter activity in developing cone photoreceptors

Webley, B. P.; Grebe, A. V.; Mohammed, B.; Lopez, J.; Zaman, A.; Ghinia-Tegla, M.; Emerson, M. M.

2026-08-07 developmental biology 10.64898/2026.08.06.743042 medRxiv
Top 1%
3.1%
Show abstract

The MAF family transcription factor Nrl is a key regulator of vertebrate rod photoreceptor formation/differentiation. The expression of Nrl in nascent photoreceptors has been proposed to act as a master regulator to initiate a rod program and to repress a default cone photoreceptor sister fate. The evidence for rod-specific expression of Nrl has been most strongly supported by mouse transgenic models that use a transcriptional promoter element for Nrl. However, this element has not been rigorously evaluated to have rod lineage-specific activity or as a validated proxy for endogenous Nrl expression, despite its wide use under this assumption. Here we identify that the Nrl promoter is not exclusively active in rod photoreceptors but is also transiently active within a high proportion of the differentiating cone photoreceptor population. Thus, the Nrl promoter cannot be used to distinguish rods from cones at developmental timepoints. Furthermore, multiple lines of evidence using immunofluorescence and reanalysis of published single cell RNA-seq/ATAC-seq datasets support the presence of endogenous Nrl gene expression in early differentiating cone photoreceptors. Taken together, these results suggest that proposed gene regulatory networks that position Nrl as a master regulator of rod versus cone fate are inadequate as currently constructed. This impacts our understanding of visual system evolution and has implications for the development of therapeutic strategies of cell replacement for human blindness.

15
Loss of Zbtb20 disrupts cochlear supporting cell differentiation and maturation and extends the postnatal hair cell regenerative window in mice.

Morgan, C. T.; Rehman, Z. U.; Doetzlhofer, A.

2026-08-20 developmental biology 10.64898/2026.08.19.745776 medRxiv
Top 1%
2.8%
Show abstract

Cochlear hair cell (HC) loss is a leading cause of hearing loss in humans. HCs can be generated from adjacent supporting cells (SCs); however, this regenerative capacity is lost after the onset of hearing. Using Emx2Cre Zbtb20 knockout mice, we show that ZBTB20 deficiency delays cell-cycle exit, differentiation, and maturation of cochlear SCs. Transcriptomic analysis of postnatal cochlear sensory epithelia indicates that ZBTB20 loss postpones the downregulation of progenitor genes, including Sox11 and Hmga2, and delays activation of a maturation-specific gene program. Additionally, experiments with cochlear organoid and organotypic explant models, reveal that prolonged, and to a lesser extent acute, ZBTB20 loss increases the mitotic and HC-regenerative potential of cochlear SCs. Transcriptomic profiling shows that acute ZBTB20 loss upregulates the midkine receptor Ptprz1, and further studies show that exogenous midkine, similar to ZBTB20 loss, promotes cell-cycle reentry and proliferation in cochlear organoid cultures.

16
TGF-β2-induced Snail-mediated EndMT signaling relies on both Smad-dependent and independent pathways

Kalluri, V. S.; Li, B.; Comptdaer, A. M.; Kirtley, M.; Arian, K. A.; Zhou, X.; Kalluri, R.

2026-08-20 cell biology 10.64898/2026.08.17.745236 medRxiv
Top 1%
2.7%
Show abstract

Endothelial-to-mesenchymal transition (EndMT) has become a central mechanism in developmental biology, fibrosis, vascular disease, and cancer. We previously reported on an integrated signaling model in which TGF-{beta}2 induces EndMT through coordinated activation of Smad-dependent and Smad-independent signaling pathways converging on Snail, while GSK-3{beta} regulates Snail activity. We performed a systematic figure-by-figure reproducibility analysis of the original publication. Independent studies published between 2011 and 2026 were identified and curated according to predefined inclusion criteria. Each original experimental conclusion was evaluated for independent confirmation. In parallel, selected biochemical experiments were independently reproduced using newly acquired reagents and contemporary Western blot methodologies. Independent publications consistently reproduced each major mechanistic conclusion of the original study, including activation of Smad, ERK, PI3K/AKT, and p38 MAPK signaling, regulation of Snail expression, EndMT-associated marker switching, and GSK-3{beta}-dependent control of Snail activity. Independent laboratory experiments reproduced the principal biochemical findings using contemporary reagents and experimental workflows. The combined literature analysis and independent laboratory replication demonstrate that the mechanistic framework in our previous study has remained reproducible across multiple laboratories, endothelial cell types, disease models, and fifteen years of investigation. This work illustrates a complementary framework for assessing reproducibility that integrates direct experimental replication with cumulative independent validation.

17
Regucalcin-containing extracellular vesicles suppress M2 macrophage polarization and attenuate tumor progression in vivo

Okada, R.; Tominaga, K.; Yamamoto, T.; Yamaguchi, M.; Tominaga, N.

2026-08-11 cancer biology 10.64898/2026.08.09.743746 medRxiv
Top 1%
2.7%
Show abstract

Regucalcin (RGN) plays diverse roles in cell biology, highlighting its importance in both physiological and pathological conditions. Prostate cancer patients with higher RGN expression exhibited significantly longer disease-free survival. Although RGN is a cell signaling suppressor, the molecular mechanisms underlying tumor suppression by RGN in the tumor microenvironment through cell-cell communication remain unclear. PC3 prostate cancer cell lines stably expressing RGN or a control vector were generated for this study. Extracellular vesicles (EVs) were isolated from these cell lines using differential ultracentrifugation. The murine macrophage cell line J7441 was treated with isolated EVs, and effects on M2 polarization were evaluated using qRT-PCR and western blot analysis. To assess the potential anti-tumor effects of EVs, PC3 parental cells were subcutaneously implanted at two sites per mouse, followed by intratumoral injection of the respective EVs. Tumor volume was monitored. Harvested fresh frozen tumor tissues underwent immunofluorescence staining for CD206, an M2 macrophage marker. RGN was detected in EVs from RGN-expressing cells, and treatment with these RGN-containing EVs was associated with reduced tumor growth and reduced M2 macrophage polarization in vitro and in vivo. Furthermore, recombinant RGN protein reduced the levels of p-AKT1 and p-ERK1/2. Moreover, the suppression of M2 macrophage polarization by RGN-containing EVs was accompanied by decreased p-AKT1 and p-ERK1/2 in vitro. This study describes an EV-associated mechanism that may contribute to the regulation of macrophage polarization and indicates that RGN-containing EVs merit further evaluation as a candidate approach for cancer treatment. Causal validation, such as macrophage depletion or CD206 knockdown, and evaluation in additional models remain to be addressed in future studies.

18
Trehalose exerts cryoprotective effects on piglet testicular tissue

Huang, Y.; Liu, N.; Liu, J.; Wei, Y.; Wang, X.; Li, X.; Xu, C.; Zheng, J.; Hu, C.

2026-08-23 cell biology 10.64898/2026.08.18.745558 medRxiv
Top 1%
2.6%
Show abstract

The cryopreservation of testicular tissue is crucial for maintaining male fertility; However, its efficacy is often compromised by oxidative stress and mitochondrial dysfunction. Trehalose, a natural cryoprotectant, demonstrates significant potential, yet its specific mechanisms, particularly in mitochondrial regulation, remain insufficiently characterized. This study aimed to investigate the cryoprotective effects of trehalose on testicular tissue from 18-21-day-old piglets, with a focus on mitochondrial metabolism. Samples were cryopreserved via a slow-freezing protocol in a modified standard solution containing 200 mmol/L trehalose. The protective effect was evaluated by measuring testosterone synthesis, blood testis barrier (BTB) and spermatogenesis. Additionally, protective outcomes were assessed by measuring cell viability, tissue morphology, reactive oxygen species (ROS) levels, apoptosis rates, and testosterone secretion following freeze-thaw cycles. Transcriptomic sequencing and bioinformatics analyses were conducted to elucidate the underlying molecular mechanism. Cryopreservation led to reduced testosterone synthesis and secretion, decreased levels of BTB-binding proteins, and impaired spermatogenesis. Results indicated that 200 mmol/L trehalose significantly improved cell survival, decreased apoptosis and ROS levels, and enhanced testosterone secretion. 200 mmol/L trehalose partially increased the expression of StAR and CYP11A1 genes associated with testosterone synthesis while it protected the tight junction proteins Claudin-11, ZO-1 and the gap junction protein Cx43. Consequently, it exerted a reproductive protective effect by increasing the expression of key spermatogenic regulators DDX25, HMGB2, acrosomal protein DYP19L2, and sperm tail proteins AKAP4 and CFAP44. Transcriptomic profiling demonstrated that trehalose predominantly restored the transcriptional expression of genes involved in the mitochondrial electron transport chain and oxidative phosphorylation pathways, including ND2, COX2, ATP8, ATP6, ND5, ND6 and CYTB. These findings indicate that trehalose primarily protects piglet testicular tissue during cryopreservation by enhancing mitochondrial function, thereby providing a molecular basis for optimizing cryopreservation protocols.

19
Surface N-acetylglucosamine dynamics in bovine spermatozoa: from epididymal transit to oviductal epithelial cell binding

Alvarez, P. A.; Leiva, N. L.; Carvelli, F. L.; Robina, I.; Sosa Escudero, M. A.; Aguilera, A. C.

2026-08-10 biochemistry 10.64898/2026.08.07.743513 medRxiv
Top 1%
2.5%
Show abstract

The sperm surface glycocalyx undergoes extensive remodeling during epididymal maturation, required for sperm to reach and bind the oviductal epithelium. N-acetylglucosamine (GlcNAc)-containing glycans are candidate mediators of these events, however, how these residues are regulated across the reproductive tract, and whether their changes depend on specific epididymal enzymes or functionally contribute to sperm-oviduct epithelial adhesion, remains poorly defined. Here, we addressed this gap by examining how surface GlcNAc changes as sperm mature and become functionally competent, from epididymal maturation through capacitation and the acrosome reaction. We further asked whether these changes relate to the ability of spermatozoa to bind the oviductal epithelium. Surface GlcNAc, assessed by WGA reactivity, increased progressively from caput to cauda epididymal spermatozoa, with a corresponding shift in GlcNAc-bearing protein profiles, while remaining predominantly localized to the acrosomal region throughout maturation. Incubation of caput spermatozoa with cauda epididymal fluid reduced WGA labeling, an effect blocked by the selective {beta}-N-acetylglucosaminidase ({beta}-NAG) thiourea derived hydroxy pyrrolidine inhibitor VP150, identifying luminal {beta}-NAG as an active contributor to GlcNAc remodeling in the epididymis. In ejaculated spermatozoa, capacitation induced minor changes in surface GlcNAc, whereas the calcium ionophore-induced acrosome reaction produced a marked reduction in WGA reactivity and acrosomal labeling, consistent with glycoprotein loss during acrosomal exocytosis. Functionally, spermatozoa that bound to BOEC monolayers were preferentially WGA-positive, and pre-incubation of BOECs with WGA significantly reduced sperm adhesion, implicating surface GlcNAc in sperm-oviduct epithelial recognition. Together, these findings define surface GlcNAc as a dynamically regulated glycan that is progressively established during epididymal transit, partly through luminal {beta}-NAG activity, redistributed during capacitation and acrosomal exocytosis, and functionally engaged during sperm-BOEC adhesion, providing a mechanistic framework for glycocalyx-mediated sperm selection in cattle.

20
Paternal cardiac injury elicits an inflammatory signal relay to the gonads with intergenerational cardiac effects in vertebrates

Coppe, B.; Arora, P.; Galardi Castilla, M.; Sanz-Morejon, A.; Meister, T.; Skvortsova, K.; Kupferschmid, B.; Mangattu Parambil, A. M.; Kirschke, N.; Gadient, G.; Marques, I. J.; Rexhaj, E.; Bogdanovic, O.; Mercader, N.

2026-08-24 developmental biology 10.64898/2026.08.22.746193 medRxiv
Top 2%
2.4%
Show abstract

The blood-gonadal barrier protects the germline from parental exposures. A phenomenon known as intergenerational inheritance suggests that, exceptionally, this barrier can be surpassed with consequences for the subsequent generation. Specific diet regimes and early traumatic experiences have been among the chronic stressors shown to be able to lead to intergenerational inheritance in mammals. Less is known about how acute stress can affect the germline. Cardiac damage leads to several alterations in peripheral organs and, overall, affects blood flow, metabolism, and the immune response. Whether cardiac damage can also affect the reproductive system is not known and might offer new insights into the potential inheritance of cardiovascular disease. Here, we used zebrafish and mouse models to explore the intergenerational role of cardiac damage and repair. In the first week after a cardiac cryolesion, male zebrafish gonads and gametes activated responses associated with inflammation. In sperm, chromatin accessibility was found altered in response to cardiac cryolesion. Offspring of cryoinjured zebrafish males revealed changes in cardiac function and cardiac gene expression. Induction of systemic sterile inflammation in the paternal generation mimicked cardiac injury effects in the following generation, while anti-inflammatory treatments in the injured paternal generation partially recovered F1 cardiac features. Similar features were found in mouse testis after a neonatal injury, and in the hearts of their offspring, suggesting a conserved role of sterile inflammation as a vector for intergenerational transmission of cardiac injury.